Arthrobacter oryzae strain DSM 25586

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter oryzae strain DSM 25586 is a notable bacterium characterized by the presence of flagella, which facilitates motility. This strain has been cataloged with a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is available under the accession number RBIR00000000.1. The flagella presence suggests that Arthrobacter oryzae DSM 25586 can navigate its environment, which may play a significant role in its ecological interactions. This capability is particularly important in various ecological niches, where movement can enhance nutrient acquisition and contribute to competitive advantages over other microorganisms. Arthrobacter species, including A. oryzae, are known for their versatility in degrading a range of organic compounds, which positions them as important players in soil ecosystems and bioremediation processes. The capacity for motility may further enhance their ability to colonize different substrates and respond to environmental changes, underscoring their ecological adaptability and potential benefits in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter oryzae
Strainstrain DSM 25586

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter oryzae strain DSM 25586 Ga0215705_119, whole genome

Gene Summary

Adenine Count

709289 bp

Thymine Count

709582 bp

Guanine Count

1447896 bp

Cytosine Count

1445758 bp

Genome Length

4313973 bp

Protein-coding Genes

3852 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C8D78_3411Not AvailablePositive3705911 - 370690634996.8
hypothetical proteinC8D78_3412Not AvailableNegative3708190 - 370846810096.7
mhs family metabolite:h+ symporter-like mfs transporterC8D78_3413Not AvailableNegative3708609 - 371007851483.3
had superfamily hydrolase (tigr01509 family)C8D78_3414Not AvailableNegative3710430 - 371112224197.8
2-keto-3-deoxy-phosphogluconate aldolaseC8D78_3415Not AvailableNegative3711243 - 371188121775.0
2-dehydro-3-deoxygluconokinaseC8D78_3416Not AvailableNegative3711952 - 371291133915.9
carbohydrate abc transporter membrane protein 2 (cut1 family)C8D78_3417Not AvailableNegative3712908 - 371381632167.1
carbohydrate abc transporter membrane protein 1 (cut1 family)C8D78_3418Not AvailableNegative3713819 - 371482336774.6
carbohydrate abc transporter substrate-binding protein (cut1 family)C8D78_3419Not AvailableNegative3714904 - 371619644874.6
laci family transcriptional regulatorC8D78_3420Not AvailablePositive3716469 - 371749136569.6

Displaying genes 3381 – 3390 of 3907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.