Arthrobacter oryzae strain DSM 25586

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter oryzae strain DSM 25586 is a notable bacterium characterized by the presence of flagella, which facilitates motility. This strain has been cataloged with a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is available under the accession number RBIR00000000.1. The flagella presence suggests that Arthrobacter oryzae DSM 25586 can navigate its environment, which may play a significant role in its ecological interactions. This capability is particularly important in various ecological niches, where movement can enhance nutrient acquisition and contribute to competitive advantages over other microorganisms. Arthrobacter species, including A. oryzae, are known for their versatility in degrading a range of organic compounds, which positions them as important players in soil ecosystems and bioremediation processes. The capacity for motility may further enhance their ability to colonize different substrates and respond to environmental changes, underscoring their ecological adaptability and potential benefits in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter oryzae
Strainstrain DSM 25586

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter oryzae strain DSM 25586 Ga0215705_119, whole genome

Gene Summary

Adenine Count

709289 bp

Thymine Count

709582 bp

Guanine Count

1447896 bp

Cytosine Count

1445758 bp

Genome Length

4313973 bp

Protein-coding Genes

3852 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase involved in cell wall biosynthesisC8D78_3084Not AvailableNegative3339621 - 334170873223.1
hypothetical proteinC8D78_3085Not AvailableNegative3341720 - 334282040069.2
glycosyl transferase family 2C8D78_3086Not AvailableNegative3342965 - 334396335893.0
glycosyltransferase involved in cell wall biosynthesisC8D78_3087Not AvailableNegative3343965 - 334481630977.1
glycosyl hydrolase family 16C8D78_3088Not AvailablePositive3345300 - 334614829959.0
3',5'-cyclic amp phosphodiesterase cpdaC8D78_3089Not AvailableNegative3346188 - 334729738978.9
polyisoprenoid-binding protein yceiC8D78_3090Not AvailablePositive3347615 - 334816619673.0
uncharacterized membrane protein yccf (duf307 family)C8D78_3091Not AvailablePositive3348245 - 334865814875.1
uncharacterized protein yndb with ahsa1/start domainC8D78_3092Not AvailablePositive3348717 - 334919017681.4
putative metal-dependent hd superfamily phosphohydrolaseC8D78_3093Not AvailableNegative3349227 - 335009631778.6

Displaying genes 3061 – 3070 of 3907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.