Arthrobacter oryzae strain DSM 25586

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter oryzae strain DSM 25586 is a notable bacterium characterized by the presence of flagella, which facilitates motility. This strain has been cataloged with a single replicon, indicating a streamlined genomic organization. The genomic information for this strain is available under the accession number RBIR00000000.1. The flagella presence suggests that Arthrobacter oryzae DSM 25586 can navigate its environment, which may play a significant role in its ecological interactions. This capability is particularly important in various ecological niches, where movement can enhance nutrient acquisition and contribute to competitive advantages over other microorganisms. Arthrobacter species, including A. oryzae, are known for their versatility in degrading a range of organic compounds, which positions them as important players in soil ecosystems and bioremediation processes. The capacity for motility may further enhance their ability to colonize different substrates and respond to environmental changes, underscoring their ecological adaptability and potential benefits in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter oryzae
Strainstrain DSM 25586

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter oryzae strain DSM 25586 Ga0215705_119, whole genome

Gene Summary

Adenine Count

709289 bp

Thymine Count

709582 bp

Guanine Count

1447896 bp

Cytosine Count

1445758 bp

Genome Length

4313973 bp

Protein-coding Genes

3852 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter membrane protein 2 (paat family)C8D78_1080Not AvailablePositive1157670 - 115850629675.6
succinyldiaminopimelate desuccinylaseC8D78_1081Not AvailableNegative1158631 - 115978540326.8
2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferaseC8D78_1082Not AvailablePositive1159925 - 116094735494.0
hypothetical proteinC8D78_1083Not AvailablePositive1161057 - 116190829387.4
hypothetical proteinC8D78_1084Not AvailableNegative1162013 - 116262422564.0
tetr family transcriptional regulatorC8D78_1085Not AvailableNegative1162683 - 116335423842.7
citrate synthaseC8D78_1086Not AvailableNegative1163562 - 116484547555.1
succinyldiaminopimelate aminotransferaseC8D78_1087Not AvailableNegative1165074 - 116622240549.3
ferredoxinC8D78_1088Not AvailableNegative1166235 - 116656111978.8
hypothetical proteinC8D78_1089Not AvailablePositive1166712 - 11669608676.72

Displaying genes 1071 – 1080 of 3907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.