Bacteroides acidifaciens strain 0.1X-D8-26

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides acidifaciens strain 0.1X-D8-26 is characterized as a rod-shaped bacterium that possesses flagella, which may contribute to its motility in various environments. The strain is notable for having a single replicon, indicating a streamlined genetic structure that could influence its replication and stability in different ecological niches. The accession number for this strain is RAZM00000000.1, which allows for further reference and exploration of its genetic and phenotypic characteristics. As part of the Bacteroides genus, B. acidifaciens typically plays a significant role in the microbial community, particularly within the gastrointestinal tracts of humans and animals. These bacteria are known to be involved in the fermentation of complex carbohydrates, which can lead to the production of short-chain fatty acids that are beneficial for host health. The presence of flagella in B. acidifaciens strain 0.1X-D8-26 may enhance its ability to navigate through viscous environments, such as mucus layers, potentially allowing it to access nutrient sources more effectively than non-motile organisms. This motility could provide ecological advantages, facilitating the colonization of diverse habitats and contributing to the overall stability and functionality of microbial communities in which this strain resides. Thus, B. acidifaciens strain 0.1X-D8-26 exemplifies the adaptive strategies employed by gut microbiota in response to their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides acidifaciens
Strainstrain 0.1X-D8-26

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatlarge intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides acidifaciens strain 0.1X-D8-26 Scaffold216_1, whole

Gene Summary

Adenine Count

1365250 bp

Thymine Count

1387177 bp

Guanine Count

1057089 bp

Cytosine Count

1029670 bp

Genome Length

4855355 bp

Protein-coding Genes

3824 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinD7Y07_06440Not AvailableNegative1531886 - 153315447506.8
susc/raga family tonb-linked outer membrane proteinD7Y07_06445Not AvailableNegative1533170 - 1536382118894.0
fecr family proteinD7Y07_06450Not AvailableNegative1536717 - 153766136754.8
rna polymerase sigma-70 factorD7Y07_06455Not AvailableNegative1537844 - 153840421992.4
single-stranded-dna-specific exonuclease recjD7Y07_06460Not AvailablePositive1538573 - 154029164441.1
recq family atp-dependent dna helicaseD7Y07_06465Not AvailablePositive1540284 - 154218873626.0
tetratricopeptide repeat proteinD7Y07_06470Not AvailablePositive1542228 - 154319036511.4
prephenate dehydrataseD7Y07_06475Not AvailablePositive1543491 - 154433931836.0
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeD7Y07_06480Not AvailablePositive1544314 - 154549244199.0
3-deoxy-7-phosphoheptulonate synthaseD7Y07_06485Not AvailablePositive1545547 - 154660839676.2

Displaying genes 1291 – 1300 of 3982 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.