Bacterium D16-50 strain D16-50

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Phylum

Class

Order

Family

Genus

Description

The Bacterium D16-50 strain D16-50 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This trait is significant as the number of replicons can influence the regulation of replication and gene expression within a bacterium. The strain is cataloged under the accession number RAZA00000000.1, which allows for its identification and retrieval in genomic databases. This accession serves as a reference point for researchers studying D16-50, facilitating comparisons with other bacterial strains and providing insights into its genetic characteristics. The presence of a single replicon may suggest a potential for rapid growth and efficiency in resource utilization, which can be advantageous in competitive ecological niches. Strains like D16-50 with simplified genomic architectures often exhibit specific adaptations that enable them to thrive under particular environmental conditions. In summary, the Bacterium D16-50 strain D16-50, with its single replicon and defined genetic accessions, presents an intriguing subject for further research into its ecological roles and potential applications in microbiology. Understanding its biology and ecology could yield insights into how simplified genomic structures can influence bacterial survival and adaptability in diverse habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium D16-50 strain D16-50 Scaffold167_1, whole genome shotgun

Gene Summary

Adenine Count

1217114 bp

Thymine Count

1223168 bp

Guanine Count

1272317 bp

Cytosine Count

1250340 bp

Genome Length

4975222 bp

Protein-coding Genes

4166 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD7X48_00440Not AvailablePositive111284 - 11244743974.9
plasmid mobilization relaxosome protein mobcD7X48_00445Not AvailableNegative112506 - 11281111334.7
hypothetical proteinD7X48_00455Not AvailableNegative113053 - 11337311916.0
hypothetical proteinD7X48_00460Not AvailableNegative113327 - 11370113363.8
type ii toxin-antitoxin system rele/pare family toxinD7X48_00465Not AvailableNegative113796 - 11413413273.3
type ii toxin-antitoxin system prevent-host-death family antitoxinD7X48_00470Not AvailableNegative114124 - 1143849685.58
abc transporter substrate-binding proteinD7X48_00475Not AvailableNegative114544 - 11512220626.8
duf1836 domain-containing proteinD7X48_00480Not AvailableNegative115390 - 11602824597.6
trpr yerc/yecdD7X48_00485Not AvailablePositive116325 - 11662111314.5
polymer-forming cytoskeletal proteinD7X48_00490Not AvailableNegative116713 - 11718616599.4

Displaying genes 371 – 380 of 4424 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.