Bacterium D16-50 strain D16-50

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Phylum

Class

Order

Family

Genus

Description

The Bacterium D16-50 strain D16-50 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This trait is significant as the number of replicons can influence the regulation of replication and gene expression within a bacterium. The strain is cataloged under the accession number RAZA00000000.1, which allows for its identification and retrieval in genomic databases. This accession serves as a reference point for researchers studying D16-50, facilitating comparisons with other bacterial strains and providing insights into its genetic characteristics. The presence of a single replicon may suggest a potential for rapid growth and efficiency in resource utilization, which can be advantageous in competitive ecological niches. Strains like D16-50 with simplified genomic architectures often exhibit specific adaptations that enable them to thrive under particular environmental conditions. In summary, the Bacterium D16-50 strain D16-50, with its single replicon and defined genetic accessions, presents an intriguing subject for further research into its ecological roles and potential applications in microbiology. Understanding its biology and ecology could yield insights into how simplified genomic structures can influence bacterial survival and adaptability in diverse habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium D16-50 strain D16-50 Scaffold167_1, whole genome shotgun

Gene Summary

Adenine Count

1217114 bp

Thymine Count

1223168 bp

Guanine Count

1272317 bp

Cytosine Count

1250340 bp

Genome Length

4975222 bp

Protein-coding Genes

4166 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinD7X48_02140Not AvailableNegative494747 - 49567034090.6
dna-binding response regulatorD7X48_02145Not AvailableNegative495797 - 49647724955.6
dna-binding response regulatorD7X48_02150Not AvailablePositive496750 - 49742425567.1
sensor histidine kinaseD7X48_02155Not AvailablePositive497471 - 49890454200.6
hypothetical proteinD7X48_02160Not AvailablePositive498908 - 50012546681.2
sodium:alanine symporter family proteinD7X48_02165Not AvailablePositive500207 - 50165851445.7
peptidase tD7X48_02170Not AvailablePositive501755 - 50299045276.6
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabD7X48_02175Not AvailablePositive503011 - 50445955293.8
abc transporter atp-binding proteinD7X48_02180Not AvailablePositive504862 - 50727089525.5
duf1854 domain-containing proteinD7X48_02185Not AvailablePositive507325 - 50790021996.1

Displaying genes 681 – 690 of 4424 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.