Bacterium D16-50 strain D16-50

Kingdom

Phylum

Class

Order

Family

Genus

Description

The Bacterium D16-50 strain D16-50 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This trait is significant as the number of replicons can influence the regulation of replication and gene expression within a bacterium. The strain is cataloged under the accession number RAZA00000000.1, which allows for its identification and retrieval in genomic databases. This accession serves as a reference point for researchers studying D16-50, facilitating comparisons with other bacterial strains and providing insights into its genetic characteristics. The presence of a single replicon may suggest a potential for rapid growth and efficiency in resource utilization, which can be advantageous in competitive ecological niches. Strains like D16-50 with simplified genomic architectures often exhibit specific adaptations that enable them to thrive under particular environmental conditions. In summary, the Bacterium D16-50 strain D16-50, with its single replicon and defined genetic accessions, presents an intriguing subject for further research into its ecological roles and potential applications in microbiology. Understanding its biology and ecology could yield insights into how simplified genomic structures can influence bacterial survival and adaptability in diverse habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium D16-50 strain D16-50 Scaffold167_1, whole genome shotgun

Gene Summary

Adenine Count

1217114 bp

Thymine Count

1223168 bp

Guanine Count

1272317 bp

Cytosine Count

1250340 bp

Genome Length

4975222 bp

Protein-coding Genes

4166 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD7X48_17355Not AvailablePositive3927847 - 392857527480.9
hypothetical proteinD7X48_17365Not AvailableNegative3932116 - 393271522372.9
class c beta-lactamase-related serine hydrolaseD7X48_17370Not AvailableNegative3932753 - 393457667440.1
duf4368 domain-containing proteinD7X48_17375Not AvailablePositive3934817 - 393604947259.5
type i addiction module toxin, syme familyD7X48_17380Not AvailableNegative3936326 - 39365508567.27
xre family transcriptional regulatorD7X48_17385Not AvailablePositive3936800 - 39370128578.14
hypothetical proteinD7X48_17390Not AvailablePositive3936996 - 39371907157.75
sigma-70 family rna polymerase sigma factorD7X48_17395Not AvailablePositive3937485 - 393791016881.2
helix-turn-helix domain-containing proteinD7X48_17400Not AvailablePositive3937903 - 39381488990.06
hypothetical proteinD7X48_17405Not AvailablePositive3938618 - 39387826184.58

Displaying genes 3471 – 3480 of 4424 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.