Bacterium D16-50 strain D16-50

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Phylum

Class

Order

Family

Genus

Description

The Bacterium D16-50 strain D16-50 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. This trait is significant as the number of replicons can influence the regulation of replication and gene expression within a bacterium. The strain is cataloged under the accession number RAZA00000000.1, which allows for its identification and retrieval in genomic databases. This accession serves as a reference point for researchers studying D16-50, facilitating comparisons with other bacterial strains and providing insights into its genetic characteristics. The presence of a single replicon may suggest a potential for rapid growth and efficiency in resource utilization, which can be advantageous in competitive ecological niches. Strains like D16-50 with simplified genomic architectures often exhibit specific adaptations that enable them to thrive under particular environmental conditions. In summary, the Bacterium D16-50 strain D16-50, with its single replicon and defined genetic accessions, presents an intriguing subject for further research into its ecological roles and potential applications in microbiology. Understanding its biology and ecology could yield insights into how simplified genomic structures can influence bacterial survival and adaptability in diverse habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium D16-50 strain D16-50 Scaffold167_1, whole genome shotgun

Gene Summary

Adenine Count

1217114 bp

Thymine Count

1223168 bp

Guanine Count

1272317 bp

Cytosine Count

1250340 bp

Genome Length

4975222 bp

Protein-coding Genes

4166 genes

Non-Coding Genes

257 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate racemaseD7X48_06890Not AvailableNegative1630217 - 163106531335.0
hypothetical proteinD7X48_06895Not AvailableNegative1631043 - 163133010986.2
gntr family transcriptional regulatorD7X48_06900Not AvailableNegative1631540 - 163222025653.2
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseD7X48_06905Not AvailableNegative1632237 - 163309730421.2
hypothetical proteinD7X48_06910Not AvailableNegative1633188 - 163366717690.6
trigger factorD7X48_06915Not AvailablePositive1633804 - 163494941543.5
asparagine--trna ligaseD7X48_06920Not AvailablePositive1635012 - 163640353027.3
hypothetical proteinD7X48_06925Not AvailablePositive1636622 - 163799251022.1
trk system potassium transporter trkaD7X48_06930Not AvailablePositive1638049 - 163940748787.8
trkh family potassium uptake proteinD7X48_06935Not AvailablePositive1639421 - 164087553523.9

Displaying genes 1621 – 1630 of 4424 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.