Bacterium 1XD42-8 strain 1XD42-8

Kingdom

Phylum

Class

Order

Family

Genus

Description

Bacterium 1XD42-8 strain 1XD42-8 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can influence its replication and stability. The strain's genetic information is cataloged under the accession number RAYU00000000.1, which serves as a reference for researchers studying its properties and potential applications. The presence of only one replicon may suggest a specific adaptation to its ecological niche, allowing for efficient resource utilization and replication under certain environmental conditions. This trait could contribute to the bacterium’s survival strategies, potentially making it more competitive in its habitat. Overall, the characteristics of Bacterium 1XD42-8 strain 1XD42-8, particularly its single replicon, may offer insights into its biological functions and ecological role. Understanding these traits can help elucidate how this bacterium interacts with its environment and other microorganisms, providing a basis for further research into its applications in biotechnology or environmental microbiology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium 1XD42-8 strain 1XD42-8 Scaffold1324_1, whole genome

Gene Summary

Adenine Count

2040234 bp

Thymine Count

2008957 bp

Guanine Count

1422609 bp

Cytosine Count

1393799 bp

Genome Length

6964716 bp

Protein-coding Genes

7058 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-tetrahydrodipicolinate synthaseD7X25_02680Not AvailableNegative540435 - 54132231893.4
aspartate-semialdehyde dehydrogenaseD7X25_02685Not AvailableNegative541390 - 54246639181.0
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaD7X25_02690Not AvailablePositive542908 - 54393338427.2
trna guanosine(34) transglycosylase tgtD7X25_02695Not AvailablePositive543956 - 54508642863.9
preprotein translocase subunit yajcD7X25_02700Not AvailablePositive545180 - 54550911909.7
tigr04086 family membrane proteinD7X25_02705Not AvailablePositive545597 - 54599513968.9
six-cysteine peptide sciffD7X25_02710Not AvailablePositive546086 - 5462325075.1
thioether cross-link-forming sciff peptide maturaseD7X25_02715Not AvailablePositive546331 - 54769251976.9
hypothetical proteinD7X25_02720Not AvailablePositive547784 - 54846725838.6
tyrosine recombinase xercD7X25_02725Not AvailableNegative548472 - 54951840039.2

Displaying genes 601 – 610 of 7205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.