Bacterium 1xD42-67 strain 1xD42-67

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Phylum

Class

Order

Family

Genus

Description

Bacterium 1xD42-67 strain 1xD42-67 is characterized by having a single replicon, which indicates a streamlined genetic architecture that may facilitate efficient replication and stability of genetic material. The strain is documented under the accession number RAYO00000000.1, providing a reference for researchers seeking to study its genetic and phenotypic characteristics. The presence of a single replicon is significant as it can influence the strain's adaptability and survival in various environments. Bacteria with a single replicon often exhibit a more straightforward regulatory framework for essential processes such as replication, transcription, and translation. This may allow for rapid growth and response to environmental changes, granting the strain a competitive advantage in its ecological niche. In ecological terms, the streamlined nature of Bacterium 1xD42-67 could suggest a specialization in a particular habitat or ecological role, where efficiency in resource utilization is paramount. The strain's genetic simplicity might enable it to thrive in specific conditions, potentially making it a useful subject for studies on microbial ecology and the dynamics of microbial populations in its environment. Further research could elucidate its ecological interactions and potential applications in biotechnological processes or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium 1xD42-67 strain 1xD42-67 Scaffold106_1, whole genome

Gene Summary

Adenine Count

713284 bp

Thymine Count

711288 bp

Guanine Count

1061996 bp

Cytosine Count

1074315 bp

Genome Length

3569800 bp

Protein-coding Genes

3263 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulatorD7V91_02295Not AvailableNegative488008 - 48884131162.0
hypothetical proteinD7V91_02300Not AvailableNegative488957 - 48966725453.7
preprotein translocase subunit secaD7V91_02305Not AvailableNegative489998 - 492754103073.0
sodium:alanine symporter family proteinD7V91_02310Not AvailablePositive493343 - 49474049100.2
sigma-70 family rna polymerase sigma factorD7V91_02315Not AvailablePositive494873 - 49537019221.0
duf4179 domain-containing proteinD7V91_02320Not AvailablePositive495357 - 49645139908.8
histidine triad nucleotide-binding proteinD7V91_02325Not AvailablePositive496550 - 49688812008.3
lysr family transcriptional regulatorD7V91_02330Not AvailablePositive496896 - 49782835001.4
pas domain-containing sensor histidine kinaseD7V91_02335Not AvailableNegative497885 - 501058119250.0
hypothetical proteinD7V91_02340Not AvailableNegative501329 - 50214728193.4

Displaying genes 631 – 640 of 3465 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.