Bacterium D16-59 strain D16-59

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Phylum

Class

Order

Family

Genus

Description

Bacterium D16-59 strain D16-59 is characterized by having a single replicon, which is significant for its genomic organization and stability. This trait may impact its replication processes and overall metabolic capabilities. The strain is cataloged under the accession number RAYD00000000.1, which provides a unique identifier for researchers to access its genetic information within biological databases. The presence of a single replicon suggests a relatively streamlined genomic architecture, which may be advantageous for efficient cellular functions. Bacterial strains with fewer replicons often exhibit rapid growth rates and may have specialized adaptations to their environments, allowing them to thrive in specific ecological niches. From an ecological perspective, the genomic traits of D16-59 may reveal insights into its adaptability and ecological role. The efficiency associated with a single replicon can be crucial for survival in competitive microbial communities, where resource utilization and reproduction rates are vital for dominance. Understanding the genomic characteristics of D16-59 can contribute to broader studies of microbial ecology and the roles that specific bacterial strains play in their environments. Overall, the single replicon of Bacterium D16-59 strain D16-59 is a key trait that may influence its biological functions and ecological interactions.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacterium D16-59 strain D16-59 Scaffold192_1, whole genome shotgun

Gene Summary

Adenine Count

1569125 bp

Thymine Count

1567325 bp

Guanine Count

1112651 bp

Cytosine Count

1107440 bp

Genome Length

5372050 bp

Protein-coding Genes

4997 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulatorD7V96_02260Not AvailableNegative450579 - 45143333534.3
carboxymuconolactone decarboxylase family proteinD7V96_02265Not AvailableNegative451550 - 45194514680.9
merr family transcriptional regulatorD7V96_02270Not AvailablePositive452031 - 45239614733.8
hypothetical proteinD7V96_02275Not AvailablePositive452775 - 45308311298.6
tnpv proteinD7V96_02280Not AvailablePositive453150 - 45353615083.0
gnat family n-acetyltransferaseD7V96_02290Not AvailablePositive454438 - 45490217877.7
hypothetical proteinD7V96_02295Not AvailablePositive454932 - 45521610333.7
duf3368 domain-containing proteinD7V96_02300Not AvailablePositive455210 - 45570418111.2
hypothetical proteinD7V96_02305Not AvailablePositive455870 - 45641821488.9
hypothetical proteinD7V96_02310Not AvailablePositive456424 - 45760245568.8

Displaying genes 561 – 570 of 5132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.