Corallococcus carmarthensis strain CA043D

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Corallococcus

Description

Corallococcus carmarthensis strain CA043D is characterized by having a single replicon, indicating a streamlined genomic organization. This trait can be significant for understanding the genetic stability and adaptability of the strain in various environments. The strain is cataloged under the accession RAWE00000000.1, which serves as its unique identifier in genomic databases. In the context of microbial ecology, Corallococcus species are known for their role in the degradation of complex organic materials, particularly in soil and aquatic environments. This suggests that strain CA043D may contribute to nutrient cycling and organic matter breakdown within its habitat. Understanding the genomic characteristics of such strains can provide insights into their metabolic capabilities and ecological roles. The presence of a single replicon could imply a more efficient replication process, potentially allowing for rapid responses to environmental changes. This efficiency may be a critical factor in the strain's ability to thrive in diverse ecological niches. Overall, the traits of Corallococcus carmarthensis strain CA043D highlight its potential significance in microbial communities, particularly concerning organic matter decomposition and nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusCorallococcus
SpeciesCorallococcus carmarthensis
Strainstrain CA043D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallococcus carmarthensis strain CA043D

Gene Summary

Adenine Count

1622751 bp

Thymine Count

1623055 bp

Guanine Count

3775314 bp

Cytosine Count

3772672 bp

Genome Length

10793792 bp

Protein-coding Genes

8618 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinD7X32_42725Not AvailablePositive10404249 - 1040474618579.6
is630 family transposaseD7X32_42730Not AvailablePositive10404704 - 1040531223721.6
moxr family atpaseD7X32_42735Not AvailablePositive10405487 - 1040648835440.9
duf58 domain-containing proteinD7X32_42740Not AvailablePositive10406485 - 1040779247546.8
gnat family n-acetyltransferaseD7X32_42745Not AvailablePositive10407801 - 1040832519305.9
hypothetical proteinD7X32_42750Not AvailableNegative10408322 - 1040876515957.3
stage ii sporulation protein mD7X32_42755Not AvailableNegative10408762 - 1040977536464.5
bifunctional metallophosphatase/5'-nucleotidaseD7X32_42760Not AvailableNegative10409877 - 1041132050211.8
Trna-alaNot AvailableNot AvailablePositive10414887 - 10414962Not Available
Trna-ileNot AvailableNot AvailablePositive10415010 - 10415086Not Available

Displaying genes 8311 – 8320 of 8702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.