Corallococcus carmarthensis strain CA043D

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Corallococcus

Description

Corallococcus carmarthensis strain CA043D is characterized by having a single replicon, indicating a streamlined genomic organization. This trait can be significant for understanding the genetic stability and adaptability of the strain in various environments. The strain is cataloged under the accession RAWE00000000.1, which serves as its unique identifier in genomic databases. In the context of microbial ecology, Corallococcus species are known for their role in the degradation of complex organic materials, particularly in soil and aquatic environments. This suggests that strain CA043D may contribute to nutrient cycling and organic matter breakdown within its habitat. Understanding the genomic characteristics of such strains can provide insights into their metabolic capabilities and ecological roles. The presence of a single replicon could imply a more efficient replication process, potentially allowing for rapid responses to environmental changes. This efficiency may be a critical factor in the strain's ability to thrive in diverse ecological niches. Overall, the traits of Corallococcus carmarthensis strain CA043D highlight its potential significance in microbial communities, particularly concerning organic matter decomposition and nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusCorallococcus
SpeciesCorallococcus carmarthensis
Strainstrain CA043D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallococcus carmarthensis strain CA043D

Gene Summary

Adenine Count

1622751 bp

Thymine Count

1623055 bp

Guanine Count

3775314 bp

Cytosine Count

3772672 bp

Genome Length

10793792 bp

Protein-coding Genes

8618 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system proteinD7X32_39180Not AvailablePositive9590028 - 959062721350.9
prepilin-type n-terminal cleavage/methylation domain-containing proteinD7X32_39185Not AvailablePositive9590624 - 959172738319.6
hypothetical proteinD7X32_39190Not AvailablePositive9591754 - 959239222674.7
hd domain-containing proteinD7X32_39195Not AvailablePositive9592424 - 959284615972.2
aconitate hydratase acnaD7X32_39200Not AvailableNegative9592925 - 959566097915.5
cardiolipin synthase bD7X32_39205Not AvailableNegative9595789 - 959705747824.9
preprotein translocase subunit secaD7X32_39215Not AvailablePositive9598445 - 9601276106697.0
30s ribosomal protein s2D7X32_39220Not AvailablePositive9601618 - 960259536062.9
translation elongation factor tsD7X32_39225Not AvailablePositive9602775 - 960342824133.3
ump kinaseD7X32_39230Not AvailablePositive9603624 - 960436726832.6

Displaying genes 7631 – 7640 of 8702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.