Corallococcus carmarthensis strain CA043D

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Corallococcus

Description

Corallococcus carmarthensis strain CA043D is characterized by having a single replicon, indicating a streamlined genomic organization. This trait can be significant for understanding the genetic stability and adaptability of the strain in various environments. The strain is cataloged under the accession RAWE00000000.1, which serves as its unique identifier in genomic databases. In the context of microbial ecology, Corallococcus species are known for their role in the degradation of complex organic materials, particularly in soil and aquatic environments. This suggests that strain CA043D may contribute to nutrient cycling and organic matter breakdown within its habitat. Understanding the genomic characteristics of such strains can provide insights into their metabolic capabilities and ecological roles. The presence of a single replicon could imply a more efficient replication process, potentially allowing for rapid responses to environmental changes. This efficiency may be a critical factor in the strain's ability to thrive in diverse ecological niches. Overall, the traits of Corallococcus carmarthensis strain CA043D highlight its potential significance in microbial communities, particularly concerning organic matter decomposition and nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusCorallococcus
SpeciesCorallococcus carmarthensis
Strainstrain CA043D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallococcus carmarthensis strain CA043D

Gene Summary

Adenine Count

1622751 bp

Thymine Count

1623055 bp

Guanine Count

3775314 bp

Cytosine Count

3772672 bp

Genome Length

10793792 bp

Protein-coding Genes

8618 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (uracil(1498)-n(3))-methyltransferaseD7X32_36145Not AvailablePositive8870779 - 887151926777.6
duf2914 domain-containing proteinD7X32_36150Not AvailableNegative8871500 - 887288551008.6
grx4 family monothiol glutaredoxinD7X32_36155Not AvailableNegative8872975 - 887329211371.8
bola/ibag family iron-sulfur metabolism proteinD7X32_36160Not AvailableNegative8873310 - 88735679540.37
yqge/algh family proteinD7X32_36165Not AvailableNegative8873567 - 887411219329.5
response regulatorD7X32_36170Not AvailableNegative8874173 - 887462216271.6
abc transporter permease subunitD7X32_36175Not AvailableNegative8874688 - 887550028162.3
abc transporter permease subunitD7X32_36180Not AvailableNegative8875497 - 887638131564.2
peptide abc transporter substrate-binding proteinD7X32_36185Not AvailableNegative8876385 - 887804660787.2
endopeptidase laD7X32_36190Not AvailableNegative8878224 - 888068092000.6

Displaying genes 7041 – 7050 of 8702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.