Corallococcus carmarthensis strain CA043D

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Corallococcus

Description

Corallococcus carmarthensis strain CA043D is characterized by having a single replicon, indicating a streamlined genomic organization. This trait can be significant for understanding the genetic stability and adaptability of the strain in various environments. The strain is cataloged under the accession RAWE00000000.1, which serves as its unique identifier in genomic databases. In the context of microbial ecology, Corallococcus species are known for their role in the degradation of complex organic materials, particularly in soil and aquatic environments. This suggests that strain CA043D may contribute to nutrient cycling and organic matter breakdown within its habitat. Understanding the genomic characteristics of such strains can provide insights into their metabolic capabilities and ecological roles. The presence of a single replicon could imply a more efficient replication process, potentially allowing for rapid responses to environmental changes. This efficiency may be a critical factor in the strain's ability to thrive in diverse ecological niches. Overall, the traits of Corallococcus carmarthensis strain CA043D highlight its potential significance in microbial communities, particularly concerning organic matter decomposition and nutrient cycling processes.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusCorallococcus
SpeciesCorallococcus carmarthensis
Strainstrain CA043D

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallococcus carmarthensis strain CA043D

Gene Summary

Adenine Count

1622751 bp

Thymine Count

1623055 bp

Guanine Count

3775314 bp

Cytosine Count

3772672 bp

Genome Length

10793792 bp

Protein-coding Genes

8618 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-70 family rna polymerase sigma factorD7X32_06025Not AvailablePositive1532828 - 153345723627.5
zf-hc2 domain-containing proteinD7X32_06030Not AvailablePositive1533523 - 15337629056.08
radical sam proteinD7X32_06035Not AvailablePositive1533759 - 153482938816.2
deda family proteinD7X32_06040Not AvailablePositive1534942 - 153556522288.0
hypothetical proteinD7X32_06050Not AvailableNegative1538133 - 153845011816.1
abc transporter substrate-binding proteinD7X32_06055Not AvailableNegative1538485 - 1541634115940.0
transglutaminase domain-containing proteinD7X32_06060Not AvailablePositive1541699 - 154274836797.8
arginine n-succinyltransferaseD7X32_06065Not AvailableNegative1542732 - 154375738906.9
carbohydrate-binding proteinD7X32_06070Not AvailablePositive1544092 - 154512637029.4
hypothetical proteinD7X32_06075Not AvailablePositive1545215 - 154602730101.1

Displaying genes 1201 – 1210 of 8702 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.