Alginatibacterium sediminis strain ALS 81

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alginatibacterium

Description

Alginatibacterium sediminis strain ALS 81 is a bacterial strain characterized by a single replicon, which is notable for its genetic simplicity. The genome of this strain is accessible through the accession number RAQO00000000.1, allowing researchers to examine its genetic features and potential applications. As a member of the genus Alginatibacterium, ALS 81 may possess unique metabolic capabilities that enable it to thrive in specific ecological niches, particularly those involving alginate, a polysaccharide commonly found in marine environments. The presence of a single replicon could suggest streamlined metabolic pathways, which may enhance its adaptability to fluctuating environmental conditions. The ecological insight into Alginatibacterium sediminis strain ALS 81 is its potential role in marine ecosystems, particularly in the degradation of algal materials. This capability could contribute to nutrient cycling in marine sediments, making this strain a subject of interest for studies on microbial ecology and biogeochemical processes. Understanding the function of ALS 81 in its habitat may provide valuable information about its interactions with other microorganisms and its impact on the overall health of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlginatibacterium
SpeciesAlginatibacterium sediminis
Strainstrain ALS 81

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alginatibacterium sediminis strain ALS 81

Gene Summary

Adenine Count

1265589 bp

Thymine Count

1263368 bp

Guanine Count

973390 bp

Cytosine Count

971675 bp

Genome Length

4474452 bp

Protein-coding Genes

3985 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf962 domain-containing proteinDBZ36_00545Not AvailablePositive104243 - 10470117197.5
c4-dicarboxylate abc transporter permeaseDBZ36_00550Not AvailableNegative104759 - 10623751089.2
tripartite tricarboxylate transporter tctb family proteinDBZ36_00555Not AvailableNegative106248 - 10669416431.9
tripartite tricarboxylate transporter substrate binding proteinDBZ36_00560Not AvailableNegative106763 - 10768932584.2
hypothetical proteinDBZ36_00565Not AvailableNegative107701 - 10818318322.5
merr family transcriptional regulatorDBZ36_00570Not AvailablePositive108642 - 10906716371.2
copper-translocating p-type atpaseDBZ36_00575Not AvailablePositive109068 - 11187899835.6
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive109845 - 109941Not Available
diguanylate cyclaseDBZ36_00580Not AvailablePositive112148 - 11380061816.8
duf1254 domain-containing proteinDBZ36_00585Not AvailableNegative113936 - 11500339197.8

Displaying genes 111 – 120 of 4056 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.