Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Caryophanales
Family
Sporolactobacillaceae
Genus
Sinobaca
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Caryophanales |
| Family | Sporolactobacillaceae |
| Genus | Sinobaca |
| Species | Sinobaca qinghaiensis |
| Strain | strain DSM 17008 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | sphere |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
912587 bp
Thymine Count
969224 bp
Guanine Count
730705 bp
Cytosine Count
790740 bp
Genome Length
3403958 bp
Protein-coding Genes
3380 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | ATL39_0781 | Not Available | Positive | 790272 - 790901 | 23805.2 |
| lipopolysaccharide biosynthesis regulator ycim | ATL39_0782 | Not Available | Positive | 791036 - 792073 | 40240.5 |
| thioredoxin reductase (nadph) | ATL39_0783 | Not Available | Positive | 792192 - 793136 | 34399.9 |
| 8-oxo-dgtp diphosphatase | ATL39_0784 | Not Available | Positive | 793375 - 793863 | 18589.0 |
| upf0042 nucleotide-binding protein | ATL39_0785 | Not Available | Positive | 793838 - 794761 | 34806.9 |
| putative cofd-like protein | ATL39_0786 | Not Available | Positive | 794758 - 795702 | 34273.7 |
| hypothetical protein | ATL39_0787 | Not Available | Positive | 795732 - 796682 | 36288.4 |
| catabolite repression hpr-like protein | ATL39_0788 | Not Available | Positive | 796722 - 796976 | 9191.19 |
| atp-dependent clp protease proteolytic subunit clpp | ATL39_0789 | Not Available | Negative | 797209 - 797787 | 21191.5 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | ATL39_0790 | Not Available | Positive | 798214 - 799569 | 51749.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
