Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Caryophanales
Family
Sporolactobacillaceae
Genus
Sinobaca
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Caryophanales |
| Family | Sporolactobacillaceae |
| Genus | Sinobaca |
| Species | Sinobaca qinghaiensis |
| Strain | strain DSM 17008 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | sphere |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
912587 bp
Thymine Count
969224 bp
Guanine Count
730705 bp
Cytosine Count
790740 bp
Genome Length
3403958 bp
Protein-coding Genes
3380 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | ATL39_0579 | Not Available | Positive | 570547 - 571587 | 37971.6 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | ATL39_0580 | Not Available | Negative | 571688 - 572512 | 30938.7 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | ATL39_0581 | Not Available | Negative | 572528 - 573406 | 32333.7 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | ATL39_0582 | Not Available | Negative | 573625 - 574929 | 47952.8 |
| putative membrane protein yesl | ATL39_0583 | Not Available | Negative | 575027 - 575638 | 22931.9 |
| xylose repressor xylr | ATL39_0584 | Not Available | Negative | 575665 - 576837 | 42490.2 |
| d-xylose isomerase | ATL39_0585 | Not Available | Positive | 577084 - 578412 | 50518.6 |
| xylulokinase | ATL39_0586 | Not Available | Positive | 578473 - 579969 | 54502.7 |
| xylan 1,4-beta-xylosidase | ATL39_0587 | Not Available | Positive | 580000 - 581607 | 61731.9 |
| nitrite transporter nirc | ATL39_0588 | Not Available | Negative | 581652 - 582437 | 28031.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
