Sinobaca qinghaiensis strain DSM 17008

sphereaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Sporolactobacillaceae

Genus

Sinobaca

Description

Sinobaca qinghaiensis strain DSM 17008 is a Gram-positive, aerobic bacterium characterized by its spherical shape. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures. It possesses a single replicon and is noted for being non-spore-forming. The traits of Sinobaca qinghaiensis suggest it plays a role in environments that support aerobic microbial communities, particularly in habitats where moderate temperatures prevail. Its Gram-positive nature may also confer certain advantages, such as enhanced resilience to environmental stresses in its natural habitat. The absence of sporulation indicates that this strain may rely on consistent environmental conditions for survival and reproduction rather than forming spores as a response to adverse conditions. Given its characteristics, Sinobaca qinghaiensis may contribute to nutrient cycling in its ecosystem, utilizing aerobic processes to break down organic materials. This bacterium could play a significant role in the microbiome of its ecological niche, potentially influencing soil health and plant growth through its metabolic activities. The unique traits of this strain highlight the diversity of microbial life and its adaptive strategies within specific environmental parameters.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilySporolactobacillaceae
GenusSinobaca
SpeciesSinobaca qinghaiensis
Strainstrain DSM 17008

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinobaca qinghaiensis strain DSM 17008 Ga0074848_109, whole genome

Gene Summary

Adenine Count

912587 bp

Thymine Count

969224 bp

Guanine Count

730705 bp

Cytosine Count

790740 bp

Genome Length

3403958 bp

Protein-coding Genes

3380 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldose 1-epimeraseATL39_0579Not AvailablePositive570547 - 57158737971.6
carbohydrate abc transporter membrane protein 2 (cut1 family)ATL39_0580Not AvailableNegative571688 - 57251230938.7
carbohydrate abc transporter membrane protein 1 (cut1 family)ATL39_0581Not AvailableNegative572528 - 57340632333.7
carbohydrate abc transporter substrate-binding protein (cut1 family)ATL39_0582Not AvailableNegative573625 - 57492947952.8
putative membrane protein yeslATL39_0583Not AvailableNegative575027 - 57563822931.9
xylose repressor xylrATL39_0584Not AvailableNegative575665 - 57683742490.2
d-xylose isomeraseATL39_0585Not AvailablePositive577084 - 57841250518.6
xylulokinaseATL39_0586Not AvailablePositive578473 - 57996954502.7
xylan 1,4-beta-xylosidaseATL39_0587Not AvailablePositive580000 - 58160761731.9
nitrite transporter nircATL39_0588Not AvailableNegative581652 - 58243728031.7

Displaying genes 571 – 580 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.