Sinobaca qinghaiensis strain DSM 17008

sphereaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Sporolactobacillaceae

Genus

Sinobaca

Description

Sinobaca qinghaiensis strain DSM 17008 is a Gram-positive, aerobic bacterium characterized by its spherical shape. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperatures. It possesses a single replicon and is noted for being non-spore-forming. The traits of Sinobaca qinghaiensis suggest it plays a role in environments that support aerobic microbial communities, particularly in habitats where moderate temperatures prevail. Its Gram-positive nature may also confer certain advantages, such as enhanced resilience to environmental stresses in its natural habitat. The absence of sporulation indicates that this strain may rely on consistent environmental conditions for survival and reproduction rather than forming spores as a response to adverse conditions. Given its characteristics, Sinobaca qinghaiensis may contribute to nutrient cycling in its ecosystem, utilizing aerobic processes to break down organic materials. This bacterium could play a significant role in the microbiome of its ecological niche, potentially influencing soil health and plant growth through its metabolic activities. The unique traits of this strain highlight the diversity of microbial life and its adaptive strategies within specific environmental parameters.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilySporolactobacillaceae
GenusSinobaca
SpeciesSinobaca qinghaiensis
Strainstrain DSM 17008

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinobaca qinghaiensis strain DSM 17008 Ga0074848_109, whole genome

Gene Summary

Adenine Count

912587 bp

Thymine Count

969224 bp

Guanine Count

730705 bp

Cytosine Count

790740 bp

Genome Length

3403958 bp

Protein-coding Genes

3380 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding gntr family transcriptional regulatorATL39_0220Not AvailablePositive207445 - 20810124965.7
peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family)ATL39_0221Not AvailableNegative208086 - 20867622120.4
trehalose utilization proteinATL39_0222Not AvailablePositive209141 - 20987527747.7
putative dehydrogenaseATL39_0223Not AvailablePositive209903 - 21097340060.4
trk system potassium uptake protein trkaATL39_0224Not AvailableNegative211064 - 21172924882.9
uncharacterized protein duf1516ATL39_0225Not AvailableNegative211763 - 21212813476.5
putative hydroxymethylpyrimidine transport system atp-binding proteinATL39_0226Not AvailablePositive212497 - 21329129880.1
putative hydroxymethylpyrimidine transport system permease proteinATL39_0227Not AvailablePositive213288 - 21405527468.3
putative hydroxymethylpyrimidine transport system substrate-binding proteinATL39_0228Not AvailablePositive214052 - 21507137790.6
hypothetical proteinATL39_0229Not AvailableNegative215131 - 21562819156.4

Displaying genes 211 – 220 of 3439 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.