Chakrabartia godavariana strain KCTC 52944

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Chakrabartia

Description

Chakrabartia godavariana strain KCTC 52944 is characterized by having a single replicon. This trait is significant as it suggests a simpler genomic architecture compared to organisms with multiple replicons, potentially affecting its replication and gene expression dynamics. The strain is cataloged under the accession number RAGX00000000.1, which provides a reference for researchers looking to access its genomic data and further understand its biological functions. The single-replicon feature may indicate a streamlined genomic organization, which can be an advantage in specific ecological niches where metabolic efficiency is crucial. Such organisms might exhibit rapid growth rates and adaptability in environments with limited resources, as they may devote less energy to managing multiple replicons. In a broader ecological context, the characteristics of Chakrabartia godavariana strain KCTC 52944 may allow it to thrive in particular habitats, potentially contributing to nutrient cycling and other ecological processes. Understanding the genomic and biological traits of this strain can inform research on microbial ecology and the roles that single-replicon organisms play in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusChakrabartia
SpeciesChakrabartia godavariana
Strainstrain KCTC 52944

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chakrabartia godavariana strain KCTC 52944 M10002_Contig98, whole

Gene Summary

Adenine Count

660557 bp

Thymine Count

665609 bp

Guanine Count

1183425 bp

Cytosine Count

1173690 bp

Genome Length

3683281 bp

Protein-coding Genes

3432 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic transglycosylase domain-containing proteinD5I55_16905Not AvailablePositive3472383 - 347438073209.6
transcription elongation factor grebD5I55_16910Not AvailablePositive3474380 - 347486517727.9
polyphosphate kinaseD5I55_16915Not AvailableNegative3474872 - 347566030754.1
aspartate--trna ligaseD5I55_16920Not AvailableNegative3475864 - 347764265972.5
general stress proteinD5I55_16925Not AvailableNegative3477720 - 34778634875.42
ribonuclease dD5I55_16930Not AvailablePositive3478102 - 347929844534.7
hypothetical proteinD5I55_16935Not AvailablePositive3479166 - 347957614951.5
chromosomal replication initiator dnaaD5I55_16940Not AvailableNegative3479583 - 348018521704.3
heavy-metal-associated domain-containing proteinD5I55_16945Not AvailableNegative3480203 - 348148045491.4
phosphoribosylformylglycinamidine cyclo-ligaseD5I55_16950Not AvailablePositive3481499 - 348260538482.0

Displaying genes 3331 – 3340 of 3541 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.