Chakrabartia godavariana strain KCTC 52944

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Chakrabartia

Description

Chakrabartia godavariana strain KCTC 52944 is characterized by having a single replicon. This trait is significant as it suggests a simpler genomic architecture compared to organisms with multiple replicons, potentially affecting its replication and gene expression dynamics. The strain is cataloged under the accession number RAGX00000000.1, which provides a reference for researchers looking to access its genomic data and further understand its biological functions. The single-replicon feature may indicate a streamlined genomic organization, which can be an advantage in specific ecological niches where metabolic efficiency is crucial. Such organisms might exhibit rapid growth rates and adaptability in environments with limited resources, as they may devote less energy to managing multiple replicons. In a broader ecological context, the characteristics of Chakrabartia godavariana strain KCTC 52944 may allow it to thrive in particular habitats, potentially contributing to nutrient cycling and other ecological processes. Understanding the genomic and biological traits of this strain can inform research on microbial ecology and the roles that single-replicon organisms play in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusChakrabartia
SpeciesChakrabartia godavariana
Strainstrain KCTC 52944

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chakrabartia godavariana strain KCTC 52944 M10002_Contig98, whole

Gene Summary

Adenine Count

660557 bp

Thymine Count

665609 bp

Guanine Count

1183425 bp

Cytosine Count

1173690 bp

Genome Length

3683281 bp

Protein-coding Genes

3432 genes

Non-Coding Genes

109 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3667 domain-containing proteinD5I55_04920Not AvailablePositive1035108 - 103636746710.9
hypothetical proteinD5I55_04925Not AvailableNegative1036344 - 103695521387.9
atp-dependent metallopeptidase ftsh/yme1/tma family proteinD5I55_04930Not AvailableNegative1036962 - 103890570349.6
trna lysidine(34) synthetase tilsD5I55_04935Not AvailableNegative1038981 - 103993134426.6
outer membrane protein assembly factor bamdD5I55_04940Not AvailableNegative1040003 - 104100435067.1
helix-turn-helix domain-containing proteinD5I55_04945Not AvailableNegative1041064 - 104187928301.7
phosphoenolpyruvate--protein phosphotransferaseD5I55_04950Not AvailableNegative1041961 - 104423483887.6
glutathione s-transferaseD5I55_04955Not AvailableNegative1044293 - 104528236452.7
hypothetical proteinD5I55_04960Not AvailableNegative1045309 - 104579117133.4
nad(p)/fad-dependent oxidoreductaseD5I55_04965Not AvailableNegative1045788 - 104714950932.7

Displaying genes 1001 – 1010 of 3541 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.