Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase 1 subunit beta | D3821_01895 | Not Available | Negative | 382330 - 383460 | 43519.6 |
| ribonucleoside-diphosphate reductase 1 subunit alpha | D3821_01900 | Not Available | Negative | 383694 - 385979 | 85780.0 |
| aida-i family autotransporter yfal | D3821_01910 | Not Available | Positive | 386675 - 390421 | 130948.0 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | D3821_01915 | Not Available | Negative | 390549 - 391271 | 26557.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | D3821_01920 | Not Available | Positive | 391418 - 394045 | 96969.3 |
| duf2138 domain-containing protein | D3821_01925 | Not Available | Positive | 394194 - 395882 | 62674.7 |
| duf1175 domain-containing protein | D3821_01930 | Not Available | Positive | 395879 - 396502 | 23768.5 |
| alpha-2-macroglobulin family protein | D3821_01935 | Not Available | Positive | 396436 - 401040 | 169855.0 |
| duf2300 domain-containing protein | D3821_01940 | Not Available | Positive | 401041 - 402690 | 61551.3 |
| duf2135 domain-containing protein | D3821_01945 | Not Available | Positive | 402695 - 403471 | 28305.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




