Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate 2'-epimerase | D3821_01545 | Not Available | Negative | 309156 - 309518 | 14082.8 |
| thiol:disulfide oxidoreductase | D3821_01550 | Not Available | Negative | 309575 - 310222 | 24517.2 |
| glutathione s-transferase | D3821_01555 | Not Available | Positive | 310358 - 311002 | 24327.0 |
| phosphodiesterase yfce | D3821_01560 | Not Available | Positive | 311055 - 311609 | 20123.3 |
| nudix hydrolase | D3821_01565 | Not Available | Positive | 311667 - 312209 | 20376.9 |
| putative basic amino acid antiporter yfcc | D3821_01570 | Not Available | Negative | 312242 - 313762 | 54800.0 |
| phosphate acetyltransferase | D3821_01575 | Not Available | Negative | 313952 - 316096 | 77176.6 |
| acetate kinase | D3821_01580 | Not Available | Negative | 316171 - 317373 | 43293.0 |
| duf412 domain-containing protein | D3821_01585 | Not Available | Positive | 317711 - 318166 | 17214.1 |
| yfbu family protein | D3821_01590 | Not Available | Positive | 318249 - 318743 | 19537.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




