Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2544 domain-containing protein | D3821_01395 | Not Available | Positive | 280794 - 281615 | 30262.1 |
| endonuclease smrb | D3821_01400 | Not Available | Negative | 281686 - 282237 | 21014.5 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D3821_01405 | Not Available | Positive | 282403 - 283335 | 35003.6 |
| chorismate synthase | D3821_01410 | Not Available | Positive | 283370 - 284455 | 39139.8 |
| penicillin-insensitive murein endopeptidase | D3821_01415 | Not Available | Positive | 284459 - 285283 | 30138.4 |
| hypothetical protein | D3821_01420 | Not Available | Positive | 285283 - 286092 | 28645.2 |
| elongation factor p hydroxylase | D3821_01425 | Not Available | Positive | 286092 - 286640 | 21146.6 |
| yfcl family protein | D3821_01430 | Not Available | Positive | 286674 - 286952 | 10000.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | D3821_01435 | Not Available | Negative | 287073 - 289079 | 74438.1 |
| 3-oxoacyl-acp synthase i | D3821_01440 | Not Available | Positive | 289238 - 290458 | 42615.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




