Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf406 family protein | D3821_01345 | Not Available | Positive | 269909 - 270193 | 10318.2 |
| acetyl-coa c-acyltransferase fadi | D3821_01350 | Not Available | Positive | 270374 - 271684 | 46533.3 |
| fatty acid oxidation complex subunit alpha fadj | D3821_01355 | Not Available | Positive | 271684 - 273828 | 77076.9 |
| phosphohistidine phosphatase | D3821_01360 | Not Available | Positive | 274031 - 274516 | 17208.8 |
| type 1 fimbrial protein | D3821_01365 | Not Available | Positive | 275197 - 275760 | 19852.3 |
| fimbrial biogenesis outer membrane usher protein | D3821_01370 | Not Available | Positive | 275842 - 278487 | 97495.5 |
| fimbrial chaperone | D3821_01375 | Not Available | Positive | 278507 - 279259 | 27729.6 |
| hypothetical protein | D3821_01380 | Not Available | Positive | 279259 - 279771 | 17891.4 |
| fimbrial protein | D3821_01385 | Not Available | Positive | 279768 - 280256 | 17890.9 |
| fimbrial protein | D3821_01390 | Not Available | Positive | 280253 - 280792 | 18952.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




