Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tolr | D3821_01080 | Not Available | Negative | 207343 - 207771 | 15383.9 |
| protein tolq | D3821_01085 | Not Available | Negative | 207775 - 208467 | 25599.2 |
| acyl-coa thioester hydrolase ybgc | D3821_01090 | Not Available | Negative | 208464 - 208868 | 15562.9 |
| cyd operon protein ybge | D3821_01095 | Not Available | Negative | 209018 - 209311 | 10933.0 |
| cytochrome bd-i oxidase subunit cydx | D3821_01100 | Not Available | Negative | 209311 - 209424 | 4041.9 |
| cytochrome bd-i ubiquinol oxidase subunit 2 | D3821_01105 | Not Available | Negative | 209439 - 210578 | 42455.6 |
| cytochrome bd-i ubiquinol oxidase subunit 1 | D3821_01110 | Not Available | Negative | 210594 - 212162 | 58208.4 |
| hypothetical protein | D3821_01115 | Not Available | Negative | 212757 - 212984 | 8358.32 |
| mannosylglycerate hydrolase | D3821_01120 | Not Available | Negative | 213009 - 215642 | 100021.0 |
| heat-responsive suppressor hrsa | D3821_01125 | Not Available | Negative | 215660 - 217636 | 69672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




