Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthase | D3821_00695 | Not Available | Negative | 150108 - 151148 | 38650.3 |
| adenosylmethionine--8-amino-7-oxononanoate aminotransferase bioa | D3821_00700 | Not Available | Positive | 151235 - 152524 | 47338.3 |
| kinase inhibitor | D3821_00705 | Not Available | Positive | 152583 - 153059 | 17086.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 172878 - 173061 | Not Available |
| acyl-coa thioesterase | D3821_00905 | Not Available | Positive | 176339 - 177622 | 46084.7 |
| hydratase | D3821_00910 | Not Available | Negative | 177856 - 180117 | 81509.2 |
| anion permease | D3821_00915 | Not Available | Negative | 180300 - 181733 | 51353.8 |
| 4-oxalomesaconate tautomerase | D3821_00920 | Not Available | Negative | 181809 - 182861 | 37061.7 |
| lysr family transcriptional regulator | D3821_00925 | Not Available | Positive | 183045 - 183998 | 36074.2 |
| 6-phosphogluconolactonase | D3821_00930 | Not Available | Negative | 184039 - 185034 | 36309.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




