Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin mononucleotide phosphatase ybji | D3821_00340 | Not Available | Positive | 74340 - 75155 | 30197.9 |
| hypothetical protein | D3821_00345 | Not Available | Positive | 75241 - 75525 | 9971.24 |
| multidrug transporter mdfa | D3821_00350 | Not Available | Negative | 75566 - 76798 | 44323.7 |
| undecaprenyl-diphosphatase | D3821_00355 | Not Available | Positive | 77083 - 77679 | 22399.9 |
| deor family transcriptional regulator | D3821_00360 | Not Available | Positive | 77737 - 78495 | 28549.5 |
| d-alanyl-d-alanine carboxypeptidase | D3821_00365 | Not Available | Negative | 78542 - 79744 | 43611.3 |
| glutathione s-transferase | D3821_00370 | Not Available | Positive | 79991 - 80617 | 23714.4 |
| soluble aldose sugar dehydrogenase ylii | D3821_00375 | Not Available | Negative | 80614 - 81729 | 41056.8 |
| biofilm regulator bssr | D3821_00380 | Not Available | Negative | 81840 - 82223 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D3821_00385 | Not Available | Positive | 82436 - 83761 | 49584.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




