Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspd | D3821_00155 | Not Available | Positive | 37881 - 38105 | 7969.41 |
| macrolide abc transporter permease/atp-binding protein macb | D3821_00160 | Not Available | Negative | 38178 - 40124 | 70706.8 |
| maca family efflux pump subunit | D3821_00165 | Not Available | Negative | 40121 - 41236 | 40656.4 |
| duf535 domain-containing protein | D3821_00170 | Not Available | Positive | 41351 - 42343 | 38359.8 |
| duf2813 domain-containing protein | D3821_00175 | Not Available | Negative | 42340 - 43998 | 63593.0 |
| aquaporin | D3821_00180 | Not Available | Positive | 44424 - 45119 | 23704.2 |
| transporter | D3821_00190 | Not Available | Positive | 45614 - 46513 | 32342.2 |
| hydroxylamine reductase | D3821_00195 | Not Available | Positive | 46657 - 48309 | 60067.3 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 47582 - 47678 | Not Available |
| hybrid-cluster nad(p)-dependent oxidoreductase | D3821_00200 | Not Available | Positive | 48321 - 49289 | 35741.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




