Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | D3821_00025 | Not Available | Positive | 3840 - 5600 | 65655.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4655 - 4770 | Not Available |
| formate transporter foca | D3821_00030 | Not Available | Positive | 6006 - 6863 | 30992.6 |
| formate acetyltransferase 1 | D3821_00035 | Not Available | Positive | 6918 - 9200 | 85362.0 |
| pyruvate formate lyase-activating protein | D3821_00040 | Not Available | Positive | 9392 - 10132 | 28205.9 |
| lysr family transcriptional regulator | D3821_00050 | Not Available | Positive | 10903 - 11811 | 34296.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 11471 - 11607 | Not Available |
| inner membrane transporter ycam | D3821_00055 | Not Available | Negative | 11812 - 13242 | 52499.5 |
| mfs transporter | D3821_00060 | Not Available | Negative | 13452 - 14600 | 41434.2 |
| hydrolase | D3821_00065 | Not Available | Positive | 14914 - 15540 | 23101.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




