Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Pdca | D3821_27355 | Not Available | Negative | 5165967 - 5166146 | 6776.63 |
| Toxin protein | D3821_27360 | Not Available | Negative | 5166151 - 5166531 | 13589.1 |
| Prevention of host death by doc toxicity | D3821_27365 | Not Available | Negative | 5166531 - 5166752 | 8133.53 |
| Putative restriction-modification protein | D3821_27370 | Not Available | Positive | 5166935 - 5168491 | 57827.1 |
| restriction endonuclease subunit s | D3821_27375 | Not Available | Positive | 5168488 - 5169669 | 45085.1 |
| hsdr family type i site-specific deoxyribonuclease | D3821_27380 | Not Available | Positive | 5169791 - 5172907 | 120099.0 |
| 3'-phosphatase, 5'-polynucleotide kinase | D3821_27385 | Not Available | Negative | 5173174 - 5173680 | 19210.2 |
| Putative morphogenetic protein | D3821_27390 | Not Available | Negative | 5173753 - 5175015 | 48280.4 |
| Putative morphogenic function protein pmgr | D3821_27395 | Not Available | Negative | 5175017 - 5175235 | 8319.25 |
| Putative morphogenic function protein pmgq | D3821_27400 | Not Available | Negative | 5175317 - 5176018 | 26967.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




