Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Partition protein para | D3821_26850 | Not Available | Negative | 5096348 - 5097544 | 44224.0 |
| Hypothetical protein | D3821_26855 | Not Available | Negative | 5097713 - 5098522 | 30617.6 |
| Replication protein repa | D3821_26860 | Not Available | Negative | 5098815 - 5099699 | 33154.9 |
| Upfb | D3821_26865 | Not Available | Negative | 5100035 - 5100427 | 14641.1 |
| Outer membrane lytic protein | D3821_26870 | Not Available | Negative | 5100605 - 5101021 | 15577.7 |
| Transposase | D3821_27280 | Not Available | Positive | 5155517 - 5155732 | 7999.72 |
| Recombination enhancement function protein | D3821_27285 | Not Available | Negative | 5155709 - 5156224 | 19739.9 |
| C8 | D3821_27290 | Not Available | Negative | 5156471 - 5156782 | 11371.8 |
| Recombinase | D3821_27295 | Not Available | Negative | 5156833 - 5157864 | 38499.3 |
| Cre-associated protein | D3821_27300 | Not Available | Negative | 5157872 - 5158093 | 8686.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




