Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repl | D3821_26800 | Not Available | Positive | 5086213 - 5087058 | 30900.2 |
| Putative para protein | D3821_26805 | Not Available | Positive | 5087322 - 5088376 | 38185.4 |
| duf3892 domain-containing protein | D3821_26810 | Not Available | Negative | 5088447 - 5088734 | 10494.3 |
| Hypothetical protein | D3821_26815 | Not Available | Negative | 5089025 - 5089621 | 21783.9 |
| Putative baseplate structural protein | D3821_26820 | Not Available | Negative | 5089793 - 5090302 | 18807.1 |
| Putative morphogenetic protein pmgg | D3821_26825 | Not Available | Negative | 5090314 - 5090895 | 20624.6 |
| Tail tube protein | D3821_26830 | Not Available | Negative | 5090931 - 5091746 | 29176.8 |
| Tail sheath protein gp22 | D3821_26835 | Not Available | Negative | 5091756 - 5093345 | 56884.4 |
| Major head protein gp23 | D3821_26840 | Not Available | Negative | 5093406 - 5095112 | 62284.1 |
| Partition protein parb | D3821_26845 | Not Available | Negative | 5095330 - 5096331 | 37442.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




