Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | D3821_25855 | Not Available | Positive | 4938413 - 4938691 | 11140.2 |
| Hypothetical protein | D3821_25860 | Not Available | Positive | 4938693 - 4939742 | 39277.5 |
| Antitermination protein q | D3821_25865 | Not Available | Positive | 4939756 - 4940508 | 27927.8 |
| cold-shock protein cspf | D3821_25870 | Not Available | Negative | 4940930 - 4941142 | 7563.18 |
| Csp | D3821_25875 | Not Available | Positive | 4941443 - 4941658 | 7717.12 |
| Holin protein | D3821_25880 | Not Available | Positive | 4942412 - 4942627 | 7741.44 |
| Hypothetical protein | D3821_25885 | Not Available | Positive | 4942632 - 4942943 | 12091.3 |
| Endolysin | D3821_25890 | Not Available | Positive | 4942940 - 4943473 | 19663.6 |
| Phage-tail assembly-like protein | D3821_25895 | Not Available | Positive | 4943470 - 4943967 | 18310.8 |
| Csp | D3821_25900 | Not Available | Positive | 4944330 - 4944542 | 7684.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




