Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | D3821_24975 | Not Available | Positive | 4814560 - 4814802 | 9280.39 |
| Putative antitermination protein q | D3821_24980 | Not Available | Positive | 4814802 - 4815182 | 13898.0 |
| Hypothetical protein | D3821_24985 | Not Available | Positive | 4815500 - 4816507 | 39984.9 |
| Hypothetical protein | D3821_24990 | Not Available | Positive | 4816724 - 4816921 | 7469.08 |
| Putative dna methylase | D3821_24995 | Not Available | Positive | 4817072 - 4818130 | 40348.1 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 4818171 - 4818246 | Not Available |
| Trna,type:undet,anti_codon:???; | Not Available | Not Available | Positive | 4818254 - 4818334 | Not Available |
| Trna,type:arg,anti_codon:tct; | Not Available | Not Available | Positive | 4818348 - 4818424 | Not Available |
| Shiga toxin 2e a-subunit | D3821_25015 | Not Available | Positive | 4818515 - 4819474 | 35572.4 |
| Shiga toxin 2e b-subunit | D3821_25020 | Not Available | Positive | 4819487 - 4819750 | 9650.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




