Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf72 domain-containing protein | D3821_24880 | Not Available | Negative | 4803998 - 4804768 | 29453.4 |
| Attl | Not Available | Not Available | Positive | 4804450 - 4804461 | Not Available |
| Putative integrase | D3821_24885 | Not Available | Negative | 4804750 - 4806063 | 49475.6 |
| Putative excisionase | D3821_24890 | Not Available | Negative | 4806119 - 4806355 | 8686.62 |
| Hypothetical protein | D3821_24895 | Not Available | Negative | 4806364 - 4806510 | 5947.22 |
| Hypothetical protein | D3821_24900 | Not Available | Negative | 4806514 - 4806756 | 9575.61 |
| Hypothetical protein | D3821_24905 | Not Available | Negative | 4806788 - 4807159 | 13648.2 |
| Putative serine protease | D3821_24910 | Not Available | Negative | 4807200 - 4808027 | 30315.4 |
| Hypothetical protein | D3821_24915 | Not Available | Negative | 4808024 - 4808212 | 6932.98 |
| Hypothetical protein | D3821_24920 | Not Available | Negative | 4808389 - 4808970 | 21742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




