Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | D3821_21420 | Not Available | Positive | 4214373 - 4214555 | 6826.45 |
| Hypothetical protein | D3821_21425 | Not Available | Positive | 4214528 - 4214713 | 6902.33 |
| Hypothetical protein | D3821_21430 | Not Available | Positive | 4214691 - 4214969 | 10925.2 |
| Excisionase | D3821_21435 | Not Available | Positive | 4214941 - 4215312 | 13701.3 |
| Integrase | D3821_21440 | Not Available | Positive | 4215168 - 4216331 | 45092.5 |
| Attr | Not Available | Not Available | Positive | 4221233 - 4221244 | Not Available |
| Is2 transposase tnpb | D3821_22310 | Not Available | Positive | 4363606 - 4363824 | 8264.75 |
| Hypothetical protein | D3821_22315 | Not Available | Positive | 4363838 - 4364116 | 10609.6 |
| hypothetical protein | D3821_22320 | Not Available | Positive | 4364233 - 4364334 | 3644.39 |
| Hypothetical protein | D3821_22325 | Not Available | Positive | 4364331 - 4364786 | 17434.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




