Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Replication protein p | D3821_21370 | Not Available | Negative | 4208599 - 4209300 | 26514.9 |
| Replication protein o | D3821_21375 | Not Available | Negative | 4209297 - 4210316 | 37645.9 |
| Cii decision making protein | D3821_21380 | Not Available | Negative | 4210313 - 4210852 | 20276.4 |
| Helix-turn-helix domain-containing protein | D3821_21385 | Not Available | Negative | 4210922 - 4211152 | 8194.95 |
| Repressor protein | D3821_21390 | Not Available | Positive | 4211257 - 4211946 | 25493.6 |
| Hypothetical protein | D3821_21395 | Not Available | Positive | 4212176 - 4212556 | 13921.5 |
| Kil protein | D3821_21400 | Not Available | Positive | 4213037 - 4213243 | 7736.37 |
| hypothetical | D3821_21405 | Not Available | Positive | 4213245 - 4213322 | 2675.19 |
| Host-nuclease inhibitor protein gam | D3821_21410 | Not Available | Positive | 4213319 - 4213699 | 14527.2 |
| Putative exonuclease | D3821_21415 | Not Available | Positive | 4213696 - 4214376 | 25954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




