Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative phage tail fiber protein | D3821_20170 | Not Available | Negative | 3992648 - 3992749 | 3774.15 |
| Tail fiber | D3821_20735 | Not Available | Positive | 4088335 - 4088471 | 4887.66 |
| Putative tail fiber assembly protein | D3821_20740 | Not Available | Positive | 4088474 - 4089016 | 21157.7 |
| Contractile tail sheath protein | D3821_20745 | Not Available | Positive | 4089072 - 4090547 | 52300.9 |
| hypothetical | D3821_20750 | Not Available | Positive | 4090544 - 4090660 | 4293.31 |
| Putative tail protein | D3821_20755 | Not Available | Positive | 4090620 - 4091081 | 17124.4 |
| Phage tail x | D3821_20760 | Not Available | Positive | 4091056 - 4091274 | 8022.34 |
| Putative tail fiber protein | D3821_20765 | Not Available | Positive | 4091372 - 4092793 | 51327.5 |
| Tail fiber protein | D3821_20770 | Not Available | Positive | 4092793 - 4093356 | 20977.6 |
| spermidine/putrescine abc transporter permease potb | D3821_20775 | Not Available | Negative | 4093585 - 4094448 | 32383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




