Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:tyr,anti_codon:gta; | Not Available | Not Available | Positive | 3964807 - 3964893 | Not Available |
| Trna,type:arg,anti_codon:tct; | Not Available | Not Available | Positive | 3964899 - 3964975 | Not Available |
| hypothetical | D3821_20030 | Not Available | Positive | 3965102 - 3965305 | 7573.17 |
| Hypothetical protein | D3821_20035 | Not Available | Negative | 3966210 - 3967418 | 45944.4 |
| hypothetical protein | D3821_20040 | Not Available | Negative | 3967532 - 3967813 | 10210.6 |
| hypothetical protein | D3821_20045 | Not Available | Negative | 3967828 - 3968028 | 7404.81 |
| Pmgm | D3821_20050 | Not Available | Negative | 3968043 - 3968339 | 11083.4 |
| hypothetical protein | D3821_20055 | Not Available | Negative | 3968673 - 3968933 | 10442.5 |
| Putative protein ulx | D3821_20060 | Not Available | Negative | 3968936 - 3969370 | 16440.5 |
| Darb | D3821_20065 | Not Available | Negative | 3969407 - 3976243 | 252721.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




