Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage tail tape measure protein | D3821_17915 | Not Available | Negative | 3573128 - 3574834 | 61779.1 |
| Host nuclease inhibitor protein | D3821_17920 | Not Available | Negative | 3574849 - 3575112 | 9592.39 |
| Hypothetical protein | D3821_17925 | Not Available | Negative | 3575133 - 3575420 | 11070.5 |
| Hypothetical protein | D3821_17930 | Not Available | Negative | 3575438 - 3575857 | 16223.3 |
| Hypothetical protein | D3821_17935 | Not Available | Negative | 3575872 - 3576135 | 9234.96 |
| Kil | D3821_17940 | Not Available | Negative | 3576168 - 3576392 | 8481.39 |
| Transposase b | D3821_17945 | Not Available | Negative | 3576408 - 3577340 | 33911.0 |
| Phage transposase | D3821_17950 | Not Available | Negative | 3577415 - 3579502 | 80144.9 |
| Mu-like prophage flumu dna-binding protein ner | D3821_17955 | Not Available | Negative | 3579505 - 3579741 | 8774.65 |
| Putative ci repressor | D3821_17960 | Not Available | Positive | 3579922 - 3580467 | 20167.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




