Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tape measure protein | D3821_17275 | Not Available | Negative | 3468539 - 3471346 | 100160.0 |
| Gpe family tail protein | D3821_17280 | Not Available | Negative | 3471333 - 3471569 | 8906.51 |
| Tail protein | D3821_17285 | Not Available | Negative | 3471497 - 3471862 | 13183.7 |
| Major tail tube protein | D3821_17290 | Not Available | Negative | 3471917 - 3472429 | 18879.6 |
| Tail sheath family protein | D3821_17295 | Not Available | Negative | 3472429 - 3473613 | 43650.6 |
| Gene d protein | D3821_17300 | Not Available | Positive | 3473771 - 3474871 | 40916.5 |
| Ogr/delta-like zinc finger family protein | D3821_17305 | Not Available | Positive | 3474914 - 3475174 | 9678.37 |
| Hok/gef family protein | D3821_17310 | Not Available | Positive | 3475365 - 3475505 | 5236.6 |
| Hypothetical protein | D3821_17315 | Not Available | Positive | 3475641 - 3475937 | 10871.3 |
| Com | D3821_17320 | Not Available | Positive | 3476127 - 3476324 | 7548.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




