Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Chromosome partitioning protein | D3821_17130 | Not Available | Positive | 3449286 - 3449597 | 11323.5 |
| Carboxylate-amine ligase | D3821_17135 | Not Available | Positive | 3449661 - 3449996 | 12819.5 |
| hypothetical protein | D3821_17140 | Not Available | Positive | 3450061 - 3450585 | 20117.0 |
| Hypothetical protein | D3821_17145 | Not Available | Positive | 3450582 - 3451106 | 19735.3 |
| Hypothetical protein | D3821_17150 | Not Available | Positive | 3451203 - 3451391 | 7026.55 |
| Pbsx family portal protein | D3821_17155 | Not Available | Negative | 3451608 - 3452654 | 39285.1 |
| Helix-turn-helix domain-containing protein | D3821_17160 | Not Available | Negative | 3452654 - 3454405 | 66773.2 |
| Capsid scaffolding protein | D3821_17165 | Not Available | Positive | 3454560 - 3455396 | 30707.0 |
| Major capsid protein | D3821_17170 | Not Available | Positive | 3455419 - 3456471 | 39274.5 |
| Small terminase subunit | D3821_17175 | Not Available | Positive | 3456517 - 3457317 | 29024.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




