Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative zinc-finger containing protein | D3821_16980 | Not Available | Negative | 3428947 - 3429168 | 8281.95 |
| Hypothetical protein | D3821_16985 | Not Available | Negative | 3429168 - 3429395 | 8527.05 |
| Hypothetical protein | D3821_16990 | Not Available | Negative | 3429463 - 3429801 | 12794.4 |
| Gp32 | D3821_16995 | Not Available | Negative | 3429765 - 3429965 | 7374.93 |
| Cii | D3821_17000 | Not Available | Negative | 3429973 - 3430482 | 18820.8 |
| Hypothetical protein | D3821_17005 | Not Available | Negative | 3430515 - 3430886 | 13876.5 |
| Ci | D3821_17010 | Not Available | Positive | 3431008 - 3431868 | 31155.2 |
| Attr | Not Available | Not Available | Positive | 3431841 - 3431852 | Not Available |
| Hypothetical protein | D3821_17015 | Not Available | Positive | 3431877 - 3432215 | 12237.6 |
| Integrase | D3821_17020 | Not Available | Positive | 3432238 - 3433287 | 40437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




