Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid scaffolding protein | D3821_16930 | Not Available | Negative | 3418002 - 3418856 | 31368.0 |
| Terminase, atpase subunit | D3821_16935 | Not Available | Positive | 3419022 - 3420791 | 66502.9 |
| Portal protein | D3821_16940 | Not Available | Positive | 3420793 - 3421839 | 39252.7 |
| Hypothetical protein | D3821_16945 | Not Available | Negative | 3421870 - 3422595 | 27551.1 |
| hypothetical protein | D3821_16950 | Not Available | Negative | 3422592 - 3423410 | 30748.4 |
| hypothetical protein | D3821_16955 | Not Available | Negative | 3423462 - 3423659 | 7073.63 |
| Putative protein kinase | D3821_16960 | Not Available | Negative | 3423758 - 3425365 | 61977.9 |
| hypothetical protein | D3821_16965 | Not Available | Negative | 3425554 - 3426264 | 27338.4 |
| Hypothetical protein | D3821_16970 | Not Available | Negative | 3426426 - 3426608 | 6705.9 |
| Gp36 | D3821_16975 | Not Available | Negative | 3426723 - 3428852 | 80276.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




