Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3821_03845 | Not Available | Positive | 799086 - 799370 | 10613.4 |
| gamma-glutamyltranspeptidase | D3821_03850 | Not Available | Negative | 799408 - 801150 | 61771.4 |
| duf2756 family protein | D3821_03855 | Not Available | Positive | 801270 - 801710 | 16624.9 |
| glycerophosphoryl diester phosphodiesterase | D3821_03860 | Not Available | Negative | 801697 - 802440 | 27395.1 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | D3821_03865 | Not Available | Negative | 802437 - 803507 | 39526.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | D3821_03870 | Not Available | Negative | 803509 - 804354 | 31473.5 |
| sn-glycerol 3-phosphate abc transporter permease | D3821_03875 | Not Available | Negative | 804351 - 805238 | 33265.6 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb | D3821_03880 | Not Available | Negative | 805336 - 806652 | 48451.2 |
| abc transporter atp-binding protein | D3821_03885 | Not Available | Negative | 807051 - 807764 | 26311.9 |
| abc transporter atp-binding protein | D3821_03890 | Not Available | Negative | 807766 - 808533 | 28428.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




