Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructoselysine 6-kinase | D3821_03480 | Not Available | Positive | 718272 - 719057 | 28333.3 |
| transcriptional regulator | D3821_03485 | Not Available | Positive | 719157 - 719888 | 27822.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D3821_03490 | Not Available | Negative | 720040 - 721125 | 38601.7 |
| hypothetical protein | D3821_03495 | Not Available | Negative | 721137 - 722441 | 46461.2 |
| duf2620 domain-containing protein | D3821_03500 | Not Available | Negative | 722453 - 722806 | 12479.5 |
| phosphopentomutase | D3821_03510 | Not Available | Negative | 723691 - 724917 | 44589.2 |
| yhfx family plp-dependent enzyme | D3821_03515 | Not Available | Negative | 724917 - 726080 | 42324.9 |
| prd domain-containing protein | D3821_03520 | Not Available | Negative | 726164 - 726526 | 13544.5 |
| hypothetical protein | D3821_03525 | Not Available | Negative | 726543 - 727448 | 33506.4 |
| hypothetical protein | D3821_03530 | Not Available | Negative | 727482 - 727718 | 8298.16 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




