Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3821_03155 | Not Available | Negative | 659120 - 659533 | 14809.7 |
| duf4339 domain-containing protein | D3821_03160 | Not Available | Negative | 659803 - 660342 | 20705.2 |
| patatin-like phospholipase family protein | D3821_03165 | Not Available | Negative | 661056 - 662126 | 38193.1 |
| chemotaxis protein | D3821_03170 | Not Available | Negative | 662123 - 663028 | 34078.1 |
| dgtpase | D3821_03175 | Not Available | Negative | 663025 - 665409 | 89608.4 |
| autotransporter adhesin ag43 | D3821_03180 | Not Available | Negative | 665520 - 668369 | 97821.0 |
| gtpase family protein | D3821_03185 | Not Available | Negative | 668741 - 669613 | 32469.8 |
| is66 family insertion sequence hypothetical protein | D3821_03190 | Not Available | Positive | 669840 - 670490 | 24222.3 |
| is66 family insertion sequence hypothetical protein | D3821_03195 | Not Available | Positive | 670490 - 670837 | 13056.0 |
| is66 family transposase | D3821_03200 | Not Available | Positive | 670857 - 672428 | 58733.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




