Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis glycosyltransferase wcae | D3821_02825 | Not Available | Positive | 602601 - 603347 | 27946.6 |
| colanic acid biosynthesis acetyltransferase wcaf | D3821_02830 | Not Available | Positive | 603363 - 603911 | 19963.2 |
| gdp-mannose 4,6-dehydratase | D3821_02835 | Not Available | Positive | 603938 - 605059 | 42035.1 |
| gdp-l-fucose synthase | D3821_02840 | Not Available | Positive | 605062 - 606030 | 36259.3 |
| gdp-mannose mannosyl hydrolase | D3821_02845 | Not Available | Positive | 606030 - 606509 | 18238.5 |
| colanic acid biosynthesis glycosyltransferase wcai | D3821_02850 | Not Available | Positive | 606506 - 607729 | 44862.6 |
| mannose-1-phosphate guanyltransferase | D3821_02855 | Not Available | Positive | 607732 - 609168 | 52990.1 |
| phosphomannomutase cpsg | D3821_02860 | Not Available | Positive | 609273 - 610643 | 50411.3 |
| undecaprenyl-phosphate glucose phosphotransferase | D3821_02865 | Not Available | Positive | 610698 - 612092 | 52397.5 |
| colanic acid exporter | D3821_02870 | Not Available | Positive | 612094 - 613572 | 53710.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




