Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 12-246M UB12-246M1_c978 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1362129 bp
Thymine Count
1372700 bp
Guanine Count
1386795 bp
Cytosine Count
1373563 bp
Genome Length
5495193 bp
Protein-coding Genes
5455 genes
Non-Coding Genes
660 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | D3821_02775 | Not Available | Positive | 589951 - 590532 | 21222.4 |
| outer membrane assembly protein asma | D3821_02780 | Not Available | Positive | 590554 - 592407 | 68975.9 |
| terc family protein | D3821_02785 | Not Available | Negative | 592681 - 594264 | 59384.8 |
| lipoprotein | D3821_02790 | Not Available | Positive | 594923 - 596062 | 41912.4 |
| protein-tyrosine-phosphatase | D3821_02795 | Not Available | Positive | 596068 - 596511 | 16710.2 |
| tyrosine-protein kinase wzc | D3821_02800 | Not Available | Positive | 596514 - 598676 | 79386.8 |
| colanic acid biosynthesis glycosyltransferase wcaa | D3821_02805 | Not Available | Positive | 598854 - 599693 | 33037.5 |
| serine acetyltransferase | D3821_02810 | Not Available | Positive | 599696 - 600184 | 17616.6 |
| colanic acid biosynthesis glycosyltransferase wcac | D3821_02815 | Not Available | Positive | 600181 - 601398 | 45240.6 |
| putative colanic acid polymerase wcad | D3821_02820 | Not Available | Positive | 601373 - 602590 | 45412.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




